Version container recipes
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SPIRITT
SeqeraSeqera
Science operations, connected
Use Seqera pipeline and workflow records with Wave containers to build a reproducible research operations desk. Bring accessible pipelines, compute environments, and workflow runs into one workspace-scoped view.
What you can do with Seqera.
A map of your compute work
Bring accessible pipelines, compute environments, and workflow runs into one workspace-scoped view.
Containers with evidence
Build Wave images from approved recipes, check build status, and preserve the resulting image identity and logs.
Research handoffs that stick
Connect run records and container metadata to the lab's repository, ownership register, and follow-up queue.
Works with your other apps.
Get started in three steps.
01
Open your workspace
Start a SPIRITT workspace to build a research operations desk. Bring the operating rules and source records you want it to use.
02
Connect Seqera
Connect your Seqera account with access to the records and actions your mission needs. Connect the companion apps you want involved in the handoff.
03
Delegate an outcome
Start with: Build a research operations desk. Define the account scope, approval rules, and destination for the result. SPIRITT runs the work and verifies the outcome.
Hand over a mission.
Choose a mission. Make it yours.
Put Seqera to work.
Science operations, connected
Questions
Seqera, with SPIRITT.
01Can it build a research operations view?+
Bring accessible pipelines, compute environments, and workflow runs into one workspace-scoped view. Join IDs to our Google Sheets study register, show the returned run states, and create Linear tasks for unmapped studies.
02Can it build and verify Wave containers?+
Build Wave images from approved recipes, check build status, and preserve the resulting image identity and logs. Check its build status, retrieve logs on failure, inspect the resulting image metadata on success, and record its digest in the experiment handoff.
03How does it connect containers to research work?+
Connect run records and container metadata to the lab's repository, ownership register, and follow-up queue. Join them to GitHub recipe commits and publish a reproducibility record in Notion for each experiment.
04What do I connect to get started with Seqera?+
Connect your Seqera account, identify the records or project scope for the mission, and provide the operating rules. For build a research operations desk, start with the source inputs described in that mission and authorize the companion apps used for its handoffs.
05Can it launch a Nextflow pipeline run?+
This connection lists pipelines, workflows, and compute environments and can build Wave containers. It does not launch Seqera pipeline runs; SPIRITT delivers verified container handoffs and coordinates run execution through your separately authorized process.
06Can event discovery create an active pipeline trigger?+
No. Listing action event types and validating a proposed name prepares a grounded setup handoff. The workflow can coordinate that configuration work, but those checks do not create an action or install a trigger.